Stem-loop cli-mir-365-2

Accession

MI0030036

Description

Columba livia cli-mir-365-2 precursor miRNA

Sequence

42948 reads, 695.0 reads per million, 30 experiments

gcaagaaaaaugAGGGACUUUCAGGGGCAGCUGUGuuuugcuaacccagucaUAAUGCCCCUAAAAAUCCUUAUUGuucuugcaau
(((((((.((((((((..(((.(((((((((((.(((.....))).)))).....))))))).))).)))))))).)))))))...

Structure

---       a        AC   C       -----    U   u 
   gcaagaa aaugAGGG  UUU AGGGGCA     GCUG Guu u
   ||||||| ||||||||  ||| |||||||     |||| ||| g
   cguucuu UUAUUCCU  AAA UCCCCGU     ugac caa c
uaa       G        -A   A       AAUac    c   u 

Annotation confidence Medium

Genome context

18: 5561822-5561907 [+]

Mature cli-miR-365-2-5p

• Accession: MIMAT0038626
• Description: Columba livia cli-miR-365-2-5p mature miRNA
• Sequence: 13 - AGGGACUUUCAGGGGCAGCUGUG - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-365-3p

• Accession: MIMAT0038625
• Description: Columba livia cli-miR-365-3p mature miRNA
• Sequence: 53 - UAAUGCCCCUAAAAAUCCUUAUUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196