Stem-loop cli-mir-375

Accession

MI0030038

Description

Columba livia cli-mir-375 precursor miRNA

Sequence

28451 reads, 376.0 reads per million, 30 experiments

ccugGCGUCGAGCCCCACGUGCAAGACcugaccugaacguUUUGUUCGUUCGGCUCGCGUUAggcaggucca
(((((((.((((((..(((.(((((((...........))))))).)))..)))))))))))))........

Structure

--------       U      CC   U       cuga 
        ccugGCG CGAGCC  ACG GCAAGAC    c
        ||||||| ||||||  ||| |||||||    c
        ggAUUGC GCUCGG  UGC UGUUUug    u
accuggac       -      CU   U       caag 

Annotation confidence Not enough data

Genome context

6: 19989012-19989083 [+]

Mature cli-miR-375-5p

• Accession: MIMAT0038628
• Description: Columba livia cli-miR-375-5p mature miRNA
• Sequence: 5 - GCGUCGAGCCCCACGUGCAAGAC - 27
• Evidence: experimental ; Illumina [1]

Mature cli-miR-375-3p

• Accession: MIMAT0038629
• Description: Columba livia cli-miR-375-3p mature miRNA
• Sequence: 41 - UUUGUUCGUUCGGCUCGCGUUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196