Stem-loop cli-mir-490

Accession

MI0030055

Description

Columba livia cli-mir-490 precursor miRNA

Sequence

uucaugguucgacaCCAUGGAUCUCCAGGUGGGUCAagauuauagagauacacCAACCUGGAGGACUCCAUGCUGUugagcuguuca
...(((((((((((.(((((((((((((((.(((....(((.....)))..))).)))))))))..)))))).)))))))))))...

Structure

uuc           C      --         G   CAag   a 
   augguucgaca CAUGGA  UCUCCAGGU GGU    auu u
   ||||||||||| ||||||  ||||||||| |||    ||| a
   ugucgaguUGU GUACCU  GGAGGUCCA Cca    uag g
acu           C      CA         A   --ca   a 

Annotation confidence Not enough data

Genome context

KB375618.1: 335613-335699 [-]

Mature cli-miR-490-5p

• Accession: MIMAT0038658
• Description: Columba livia cli-miR-490-5p mature miRNA
• Sequence: 15 - CCAUGGAUCUCCAGGUGGGUCA - 36
• Evidence: experimental ; Illumina [1]

Mature cli-miR-490-3p

• Accession: MIMAT0038659
• Description: Columba livia cli-miR-490-3p mature miRNA
• Sequence: 54 - CAACCUGGAGGACUCCAUGCUGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196