Stem-loop cli-mir-551b

Accession

MI0030058

Description

Columba livia cli-mir-551b precursor miRNA

Sequence

ccauggcuccAGAAAUCAAGGGUGGGUAAGACCUcgucagcaaaguuuaagGCGACCCAUACUUGGUUUCAGGggcuguguggcuc
.(((((((((.(((((((((.((((((..(.(((...............)))).)))))).))))))))).)))))))))......

Structure

-----c         A         G      AA A   cgucag 
      cauggcucc GAAAUCAAG GUGGGU  G CCU      c
      ||||||||| ||||||||| ||||||  | |||      a
      gugucggGG CUUUGGUUC UACCCA  C Gga      a
cucggu         A         A      -G -   auuuga 

Annotation confidence Not enough data

Genome context

KB376001.1: 3540879-3540964 [-]

Mature cli-miR-551b-5p

• Accession: MIMAT0038664
• Description: Columba livia cli-miR-551b-5p mature miRNA
• Sequence: 11 - AGAAAUCAAGGGUGGGUAAGACCU - 34
• Evidence: experimental ; Illumina [1]

Mature cli-miR-551b-3p

• Accession: MIMAT0038665
• Description: Columba livia cli-miR-551b-3p mature miRNA
• Sequence: 52 - GCGACCCAUACUUGGUUUCAGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196