Stem-loop cli-mir-1329

Accession

MI0030063

Description

Columba livia cli-mir-1329 precursor miRNA

Sequence

1947 reads, 10.0 reads per million, 23 experiments

gucugguuguagagaUACAGUGAUCAGGUUACGAUGGauuucucaaguaacaaCCUCGUAGCUUGAUCACGAUAUcccuaugacuugagaa
.((.((((((((.((((..(((((((((((((((.((................)))))))))))))))))..)))).)))))))).))...

Structure

--g  u        a    CA               U  auuucuc 
   uc gguuguag gaUA  GUGAUCAGGUUACGA GG       a
   || |||||||| ||||  ||||||||||||||| ||        
   ag ucaguauc cUAU  CACUAGUUCGAUGCU CC       a
aag  u        c    AG               -  aacaaug 

Annotation confidence High

Genome context

3: 97325452-97325542 [+]

Mature cli-miR-1329-5p

• Accession: MIMAT0038672
• Description: Columba livia cli-miR-1329-5p mature miRNA
• Sequence: 16 - UACAGUGAUCAGGUUACGAUGG - 37
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1329-3p

• Accession: MIMAT0038673
• Description: Columba livia cli-miR-1329-3p mature miRNA
• Sequence: 54 - CCUCGUAGCUUGAUCACGAUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196