Stem-loop cli-mir-1451

Accession

MI0030066

Description

Columba livia cli-mir-1451 precursor miRNA

Sequence

9782 reads, 73.0 reads per million, 28 experiments

aagcgcaggagcugcugccUCGCACAGGGGCAAGUUACCGCguucagcucaccugcAGUAACUUGCUCCUGUGAGAGGUggcggcuccuggcucc
.(((.((((((((((((((((.((((((((((((((((.(((...........))).)))))))))))))))).)))))))))))))))))))..

Structure

-a   g                G                C   uuca 
  agc caggagcugcugccUC CACAGGGGCAAGUUAC GCg    g
  ||| |||||||||||||||| |||||||||||||||| |||    c
  ucg guccucggcggUGGAG GUGUCCUCGUUCAAUG cgu    u
cc   -                A                A   ccac 

Annotation confidence High

Genome context

3: 74874964-74875058 [+]

Mature cli-miR-1451-5p

• Accession: MIMAT0038678
• Description: Columba livia cli-miR-1451-5p mature miRNA
• Sequence: 20 - UCGCACAGGGGCAAGUUACCGC - 41
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1451-3p

• Accession: MIMAT0038679
• Description: Columba livia cli-miR-1451-3p mature miRNA
• Sequence: 57 - AGUAACUUGCUCCUGUGAGAGGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196