miRBase entry: cli-mir-1791

Stem-loop cli-mir-1791


Accession
MI0030081
Description
Columba livia cli-mir-1791 precursor miRNA


Sequence

201 reads, 2.0 reads per million, 21 experiments
ucagcugaugcaccguguUGGGCUGCAUCAGUCAUGCCAUGuuaugaaaccuaacaCGAUGUGACUGAUGCAGGCUGACgugaugugucacagag
.....(((((((.((((((((.((((((((((((((.(.(((((.......))))).).)))))))))))))).)))))))).))))))).....

Structure
ucagc       c        G              C A     ug 
     ugaugca cguguUGG CUGCAUCAGUCAUG C UGuua  a
     ||||||| |||||||| |||||||||||||| | |||||  a
     acugugu gugCAGUC GACGUAGUCAGUGU G acaau  a
gagac       a        G              A C     cc 


Annotation confidence High
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Genome context
11: 13990487-13990581 [+]

Database links

Mature cli-miR-1791-5p

Accession MIMAT0059190
Description Columba livia cli-miR-1791-5p mature miRNA
Sequence 19 - UGGGCUGCAUCAGUCAUGCCAUG - 41
Evidence experimental
Illumina [1]

Mature cli-miR-1791-3p

Accession MIMAT0038702
Description Columba livia cli-miR-1791-3p mature miRNA
Sequence 57 - CGAUGUGACUGAUGCAGGCUGAC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196