Stem-loop cli-mir-1805

Accession

MI0030084

Description

Columba livia cli-mir-1805 precursor miRNA

Sequence

1219 reads, 21.0 reads per million, 21 experiments

guggaauauucugggAGUUGUAGUCUUUCAAACAGAgcuucgcaaggacauaccUGUAUUGGAACACUACAGCUCCcugaacuuccuc
..((((..(((.((((((((((((.((((((((((....((.....)).....)))).)))))).)))))))))))).))).))))..

Structure

gu    ua   u            C      -    -Agcu  g 
  ggaa  uuc gggAGUUGUAGU UUUCAA ACAG     uc c
  ||||  ||| |||||||||||| |||||| ||||     || a
  ccuu  aag cCCUCGACAUCA AAGGUU UGUc     ag a
cu    -c   u            C      A    cauac  g 

Annotation confidence High

Genome context

1: 87910552-87910639 [+]

Mature cli-miR-1805-5p

• Accession: MIMAT0038705
• Description: Columba livia cli-miR-1805-5p mature miRNA
• Sequence: 16 - AGUUGUAGUCUUUCAAACAGA - 36
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1805-3p

• Accession: MIMAT0038706
• Description: Columba livia cli-miR-1805-3p mature miRNA
• Sequence: 55 - UGUAUUGGAACACUACAGCUCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196