Stem-loop cli-mir-9615

Accession

MI0030092

Description

Columba livia cli-mir-9615 precursor miRNA

Sequence

1081 reads, 7.0 reads per million, 23 experiments

aguuggugaccauuUUUCUCCCAUGGCUGUAUAACCcuuucgauauccuuggaUUGCACAGCUUUGGUAGGAAGcuggccaccaucu
((.(((((.(((.((((((.(((.((((((.(((.((.............)).))).)))))).))).)))))).))).))))).))

Structure

  u     a   u      C   U      A   C  uuucg 
ag uggug cca uUUUCU CCA GGCUGU UAA Cc     a
|| ||||| ||| |||||| ||| |||||| ||| ||     u
uc accac ggu GAAGGA GGU UCGACA GUU gg     a
  u     c   c      U   U      C   a  uuccu 

Annotation confidence High

Genome context

2: 25155235-25155321 [+]

Mature cli-miR-9615-5p

• Accession: MIMAT0038719
• Description: Columba livia cli-miR-9615-5p mature miRNA
• Sequence: 15 - UUUCUCCCAUGGCUGUAUAACC - 36
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9615-3p

• Accession: MIMAT0038720
• Description: Columba livia cli-miR-9615-3p mature miRNA
• Sequence: 54 - UUGCACAGCUUUGGUAGGAAG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196