Stem-loop cli-mir-9617

Accession

MI0030094

Description

Columba livia cli-mir-9617 precursor miRNA

Sequence

3652 reads, 26.0 reads per million, 28 experiments

ugccuguugucUUAUGAUCAUAAGGAUAAAUGAgccccaucgaguaauuaaUUUAUCCGUAUGAUCAUAAGACagcagacc
...(((((((((((((((((((.((((((((...................)))))))).)))))))))))))))))))...

Structure

ugc                   A        GAgcccca 
   cuguugucUUAUGAUCAUA GGAUAAAU        u
   ||||||||||||||||||| ||||||||        c
   gacgaCAGAAUACUAGUAU CCUAUUUa        g
cca                   G        auuaauga 

Annotation confidence Medium

Genome context

23: 856730-856810 [-]

Mature cli-miR-9617-5p

• Accession: MIMAT0038723
• Description: Columba livia cli-miR-9617-5p mature miRNA
• Sequence: 12 - UUAUGAUCAUAAGGAUAAAUGA - 33
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9617-3p

• Accession: MIMAT0038724
• Description: Columba livia cli-miR-9617-3p mature miRNA
• Sequence: 52 - UUUAUCCGUAUGAUCAUAAGAC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196