Stem-loop cli-mir-9620

Accession

MI0030097

Description

Columba livia cli-mir-9620 precursor miRNA

Sequence

ugcacaauuuccccUUUAGGAGAAAAAUCUCAGUUauugcacuuuguguaaauucaauaACUAAGAUAUUUCUCCUGAAGGggaaauggugca
(((((.(((((((((((((((((((.((((.(((((((((((...)))......)))))))).)))).))))))))))))))))))).)))))

Structure

     a                   A    C        ------   u 
ugcac auuuccccUUUAGGAGAAA AUCU AGUUauug      cac  
||||| ||||||||||||||||||| |||| ||||||||      ||| u
acgug uaaaggGGAAGUCCUCUUU UAGA UCAauaac      gug  
     g                   A    A        uuaaau   u 

Annotation confidence Not enough data

Genome context

KB375542.1: 883590-883682 [-]

Mature cli-miR-9620-5p

• Accession: MIMAT0038729
• Description: Columba livia cli-miR-9620-5p mature miRNA
• Sequence: 15 - UUUAGGAGAAAAAUCUCAGUU - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9620-3p

• Accession: MIMAT0038730
• Description: Columba livia cli-miR-9620-3p mature miRNA
• Sequence: 60 - ACUAAGAUAUUUCUCCUGAAGG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196