Stem-loop cli-mir-9621

Accession

MI0030098

Description

Columba livia cli-mir-9621 precursor miRNA

Sequence

accucccaucaggauacaUCCCGUUGGGAUGCAUUCUGUCagaaugcaccucauCAGGAUACAUCCCAUCGGGAUGcaccccauggggcag
...((((((..((...(((((((.(((((((.((((((................)))))).))))))).)))))))..))..))))))...

Structure

acc      ca  aua       U       C      UCagaau 
   ucccau  gg   caUCCCG UGGGAUG AUUCUG       g
   ||||||  ||   ||||||| ||||||| ||||||        
   ggggua  cc   GUAGGGC ACCCUAC UAGGAC       c
gac      cc  -ac       U       A      uacucca 

Annotation confidence Not enough data

Genome context

KB375448.1: 6395723-6395813 [-]

Mature cli-miR-9621-5p

• Accession: MIMAT0038731
• Description: Columba livia cli-miR-9621-5p mature miRNA
• Sequence: 19 - UCCCGUUGGGAUGCAUUCUGUC - 40
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9621-3p

• Accession: MIMAT0038732
• Description: Columba livia cli-miR-9621-3p mature miRNA
• Sequence: 55 - CAGGAUACAUCCCAUCGGGAUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196