Stem-loop cli-mir-9622

Accession

MI0030101

Description

Columba livia cli-mir-9622 precursor miRNA

Sequence

cguggggaagaugccgUGGGGGUUUCCCUGCCUGGGACccgaggugugaagggCCCGUCGGGGCUGACCCCCAUGgcagcuggcuccuuc
...((((.((.(((((((((((((.(((((..((((.(((..........))))))).)))))..))))))))))))).))..))))...

Structure

cgu    -a  a             -U     CC    A   gagg 
   gggg  ag ugccgUGGGGGUU  CCCUG  UGGG Ccc    u
   ||||  || |||||||||||||  |||||  |||| |||     
   ccuc  uc acgGUACCCCCAG  GGGGC  GCCC ggg    g
cuu    gg  g             UC     -U    -   aagu 

Annotation confidence Not enough data

Genome context

KB375405.1: 5422806-5422895 [+]

Mature cli-miR-9622-5p

• Accession: MIMAT0038735
• Description: Columba livia cli-miR-9622-5p mature miRNA
• Sequence: 17 - UGGGGGUUUCCCUGCCUGGGAC - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9622-3p

• Accession: MIMAT0038736
• Description: Columba livia cli-miR-9622-3p mature miRNA
• Sequence: 54 - CCCGUCGGGGCUGACCCCCAUG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196