Stem-loop cli-mir-9629

Accession

MI0030108

Description

Columba livia cli-mir-9629 precursor miRNA

Sequence

ucuaccaugguCACGGCCACUCGCACGAGGAGCcgcaccacggcCACUCGCACGAGGGGCUCUACCauggucac
...((((((((...((((.((((..((((..((((.....))))..))))..)))).))))..))))))))...

Structure

ucu        CAC    A    CA    GA    c 
   accauggu   GGCC CUCG  CGAG  GCcg a
   ||||||||   |||| ||||  ||||  |||| c
   ugguaCCA   UCGG GAGC  GCUC  cggc c
cac        -UC    G    AC    AC    a 

Annotation confidence Not enough data

Genome context

KB376042.1: 23161-23234 [-]

Mature cli-miR-9629-5p

• Accession: MIMAT0038749
• Description: Columba livia cli-miR-9629-5p mature miRNA
• Sequence: 12 - CACGGCCACUCGCACGAGGAGC - 33
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9629-3p

• Accession: MIMAT0038750
• Description: Columba livia cli-miR-9629-3p mature miRNA
• Sequence: 45 - CACUCGCACGAGGGGCUCUACC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196