Stem-loop cli-mir-9631

Accession

MI0030110

Description

Columba livia cli-mir-9631 precursor miRNA

Sequence

243 reads, 2.0 reads per million, 24 experiments

guucaaaggcacagaugaUAGCCAGGUGCCUCAUCUCAUGCcuguggaaaaaccugUGUGAGAGGAGUGUCUGACUGUUUucugugccuuugcga
...((((((((((((.(((((.(((..(((((.((((((((..((......))..)))))))).))).))))).))))).))))))))))))...

Structure

guu            u     C   GU  -   A        cu  gg 
   caaaggcacaga gaUAG CAG  GC CUC UCUCAUGC  gu  a
   |||||||||||| ||||| |||  || ||| ||||||||  ||   
   guuuccgugucu UUGUC GUC  UG GAG AGAGUGUg  ca  a
agc            U     A   --  U   G        uc  aa 

Annotation confidence Medium

Genome context

8: 27013904-27013998 [-]

Mature cli-miR-9631-5p

• Accession: MIMAT0038753
• Description: Columba livia cli-miR-9631-5p mature miRNA
• Sequence: 19 - UAGCCAGGUGCCUCAUCUCAUGC - 41
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9631-3p

• Accession: MIMAT0038754
• Description: Columba livia cli-miR-9631-3p mature miRNA
• Sequence: 57 - UGUGAGAGGAGUGUCUGACUGUUU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196