Stem-loop cli-mir-9638

Accession

MI0030118

Description

Columba livia cli-mir-9638 precursor miRNA

Sequence

aaauugagucaucagcAGCAAGGACCACUUAGUCCUGCucuccucucucucacgccacAGGUCUAAGUGGUCCUCGCUGCcgaugacucaauaca
..(((((((((((.(((((.((((((((((((.((((....................)))).)))))))))))).))))).)))))))))))...

Structure

-aa           a     A            U    Cucuccucu 
   auugagucauc gcAGC AGGACCACUUAG CCUG         c
   ||||||||||| ||||| |||||||||||| ||||          
   uaacucaguag CGUCG UCCUGGUGAAUC GGAc         u
aca           c     C            U    accgcacuc 

Annotation confidence Not enough data

Genome context

KB375508.1: 134059-134153 [+]

Mature cli-miR-9638-5p

• Accession: MIMAT0038769
• Description: Columba livia cli-miR-9638-5p mature miRNA
• Sequence: 17 - AGCAAGGACCACUUAGUCCUGC - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9638-3p

• Accession: MIMAT0038770
• Description: Columba livia cli-miR-9638-3p mature miRNA
• Sequence: 59 - AGGUCUAAGUGGUCCUCGCUGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196