miRBase entry: pbv-let-7a-2

Stem-loop pbv-let-7a-2

Accession

MI0030131

Description

Python bivittatus pbv-let-7a-2 precursor miRNA

Sequence

uguccuuuggggUGAGGUAGUAGGUUGUAUAGUUuuaggguuagacccugccugucagauaaCUAUACAAUCUACUGUCUUUCCugaaguggcuguga
.(((((((((((.(((((((((((((((((((((.((((((...))))))..........))))))))))))))))))))))))))))).))).....

Structure

----u   -        U                     ---------u      u 
     guc cuuugggg GAGGUAGUAGGUUGUAUAGUU          uagggu  
     ||| |||||||| |||||||||||||||||||||          |||||| a
     cgg gaaguCCU UUCUGUCAUCUAACAUAUCaa          guccca  
agugu   u        -                     uagacugucc      g

Annotation confidence Not enough data

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Genome context

KE953602.1: 74234-74331 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-let-7a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-let-7a-5p

Accession	MIMAT0038793
Description	Python bivittatus pbv-let-7a-5p mature miRNA
Sequence	13 - UGAGGUAGUAGGUUGUAUAGUU - 34
Evidence	experimental Illumina [1]

Mature pbv-let-7a-2-3p

Accession	MIMAT0038795
Description	Python bivittatus pbv-let-7a-2-3p mature miRNA
Sequence	63 - CUAUACAAUCUACUGUCUUUCC - 84
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196