Stem-loop pbv-mir-1a-2

Accession

MI0030144

Description

Python bivittatus pbv-mir-1a-2 precursor miRNA

Sequence

accugcccagagcACAUACUUCUUUAUGUACCCAUaugaagauauaauguuaUGGAAUGUAAAGAAGUAUGUAcuuuuggcagg
.((((((.((((.((((((((((((((((..(((((..............))))).)))))))))))))))).)))).))))))

Structure

a      c    c                AC     ugaaga 
 ccugcc agag ACAUACUUCUUUAUGU  CCAUa      u
 |||||| |||| ||||||||||||||||  |||||       
 ggacgg uuuc UGUAUGAAGAAAUGUA  GGUau      a
-      u    A                -A     uguaau 

Annotation confidence Not enough data

Genome context

KE953557.1: 24092-24175 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-1a-2

Mature pbv-miR-1a-3p

• Accession: MIMAT0038813
• Description: Python bivittatus pbv-miR-1a-3p mature miRNA
• Sequence: 53 - UGGAAUGUAAAGAAGUAUGUA - 73
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-1a-2-5p

• Accession: MIMAT0038814
• Description: Python bivittatus pbv-miR-1a-2-5p mature miRNA
• Sequence: 14 - ACAUACUUCUUUAUGUACCCAU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196