Stem-loop pbv-mir-7-3

Accession

MI0030148

Description

Python bivittatus pbv-mir-7-3 precursor miRNA

Sequence

ggccugcuucugauUGGAAGACUAGUGAUUUUGUUGUUcugguuuagaaagcugaCAACAAAUCACAGCCUACCAUCcagcaggggcca
(((((.((.(((..(((.((.((.(((((((.((((((..(((((...)))))))))))))))))))).)).)))..))).))))))).

Structure

-     g  u   au   A  A  A       U      cu     a 
 ggccu cu cug  UGG AG CU GUGAUUU GUUGUU  gguuu  
 ||||| || |||  ||| || || ||||||| ||||||  ||||| g
 ccggg ga gac  ACC UC GA CACUAAA CAACag  ucgaa  
a     -  c   CU   A  C  -       -      --     a 

Annotation confidence Not enough data

Genome context

KE956692.1: 125178-125266 [-]

Mature pbv-miR-7-5p

• Accession: MIMAT0038817
• Description: Python bivittatus pbv-miR-7-5p mature miRNA
• Sequence: 15 - UGGAAGACUAGUGAUUUUGUUGUU - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-7-3-3p

• Accession: MIMAT0038820
• Description: Python bivittatus pbv-miR-7-3-3p mature miRNA
• Sequence: 56 - CAACAAAUCACAGCCUACCAUC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196