Stem-loop pbv-mir-9-2

Accession

MI0030150

Description

Python bivittatus pbv-mir-9-2 precursor miRNA

Sequence

aggaagcgaguuguuaUCUUUGGUUAUCUAGCUGUAUGaguguguuggccuucaUAAAGCUAGAUAACCGAAAGUAaaaacuccuuca
..((((.(((((.((((.(((((((((((((((.((((((.((....)).)))))).))))))))))))))).)))).))))))))).

Structure

ag    c     g    C               G      u  g 
  gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGag gu u
  |||| ||||| |||| ||||||||||||||| |||||| ||  
  cuuc cucaa aAUG AAGCCAAUAGAUCGA AUacuu cg u
-a    -     a    A               A      c  g 

Annotation confidence Not enough data

Genome context

KE953277.1: 11635-11722 [+]

Mature pbv-miR-9-5p

• Accession: MIMAT0038821
• Description: Python bivittatus pbv-miR-9-5p mature miRNA
• Sequence: 17 - UCUUUGGUUAUCUAGCUGUAUG - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9-3p

• Accession: MIMAT0038822
• Description: Python bivittatus pbv-miR-9-3p mature miRNA
• Sequence: 55 - UAAAGCUAGAUAACCGAAAGUA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196