Stem-loop pbv-mir-9-3

Accession

MI0030151

Description

Python bivittatus pbv-mir-9-3 precursor miRNA

Sequence

agggccguuucugUCUUUGGUUAUCUAGCUGUAUGaguguuaucaagccaucaUAAAGCUAGAUAACCGAAAGUAgaaaugacu
.....((((((((.((((((((((((((((.(((((..(((....)))..))))).)))))))))))).))))))))))))...

Structure

agggc        U    -            G     gu   a 
     cguuucug CUUU GGUUAUCUAGCU UAUGa  guu u
     |||||||| |||| |||||||||||| |||||  |||  
     guaaagAU GAAA CCAAUAGAUCGA AUacu  cga c
--uca        -    G            A     ac   a 

Annotation confidence Not enough data

Genome context

KE955498.1: 5666-5749 [+]

Mature pbv-miR-9-5p

• Accession: MIMAT0038821
• Description: Python bivittatus pbv-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUG - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9-3p

• Accession: MIMAT0038822
• Description: Python bivittatus pbv-miR-9-3p mature miRNA
• Sequence: 54 - UAAAGCUAGAUAACCGAAAGUA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196