Stem-loop pbv-mir-9-4

Accession

MI0030152

Description

Python bivittatus pbv-mir-9-4 precursor miRNA

Sequence

acagggucgguuucucUCUUUGGUUAUCUAGCUGUAUGaguguaucugaugucaUAAAGCUAGAGAACCGAAUGUAcaaaccgccccgc
...(((.((((((.....(((((((.(((((((.(((((............))))).))))))).))))))).....)))))).)))..

Structure

aca   u      cucUC       A       G     gugua 
   ggg cgguuu     UUUGGUU UCUAGCU UAUGa     u
   ||| ||||||     ||||||| ||||||| |||||      
   ccc gccaaa     AAGCCAA AGAUCGA AUacu     c
-cg   c      cAUGU       G       A     guagu 

Annotation confidence Not enough data

Genome context

KE954471.1: 22795-22883 [+]

Mature pbv-miR-9-5p

• Accession: MIMAT0038821
• Description: Python bivittatus pbv-miR-9-5p mature miRNA
• Sequence: 17 - UCUUUGGUUAUCUAGCUGUAUG - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9-4-3p

• Accession: MIMAT0038823
• Description: Python bivittatus pbv-miR-9-4-3p mature miRNA
• Sequence: 55 - UAAAGCUAGAGAACCGAAUGUA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196