Stem-loop pbv-mir-19a

Accession

MI0030164

Description

Python bivittatus pbv-mir-19a precursor miRNA

Sequence

gcaguccucuguuAGUUUUGCAUAGUUGCACUAcaggaagaguguaguUGUGCAAAUCUAUGCAAAACUGAuuguggccuguua
((((.((.(.(((((((((((((((((((((((((.......))))...))))))..))))))))))))))).).)).))))..

Structure

--    u  u u               --      ---    gg 
  gcag cc c guuAGUUUUGCAUAG  UUGCAC   UAca  a
  |||| || | |||||||||||||||  ||||||   ||||  a
  uguc gg g uAGUCAAAACGUAUC  AACGUG   augu  g
au    c  u u               UA      Uug    ga 

Annotation confidence Not enough data

Genome context

KE958468.1: 77858-77941 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from pbv-mir-19a

Mature pbv-miR-19a-5p

• Accession: MIMAT0038843
• Description: Python bivittatus pbv-miR-19a-5p mature miRNA
• Sequence: 14 - AGUUUUGCAUAGUUGCACUA - 33
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-19a-3p

• Accession: MIMAT0038844
• Description: Python bivittatus pbv-miR-19a-3p mature miRNA
• Sequence: 49 - UGUGCAAAUCUAUGCAAAACUGA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196