Stem-loop pbv-mir-22

Accession

MI0030169

Description

Python bivittatus pbv-mir-22 precursor miRNA

Sequence

uggcuacccagcagcAGUUCUUCAGUGGCACGCUUUAcguccccuccagcagcuaAAGCUGCCAGUUGAAGAACUGUugaccguagcugc
.((((((....(((((((((((((((((((.((((((.((...........))))))))))))).))))))))))))))...))))))..

Structure

-u      ccag              -     C      c  cccc 
  ggcuac    cagcAGUUCUUCAG UGGCA GCUUUA gu    u
  ||||||    |||||||||||||| ||||| |||||| ||    c
  ucgaug    guUGUCAAGAAGUU ACCGU CGAAau cg    c
cg      -cca              G     -      -  acga 

Annotation confidence Not enough data

Genome context

KE957638.1: 96450-96539 [-]

Mature pbv-miR-22-5p

• Accession: MIMAT0038851
• Description: Python bivittatus pbv-miR-22-5p mature miRNA
• Sequence: 16 - AGUUCUUCAGUGGCACGCUUUA - 37
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-22-3p

• Accession: MIMAT0038852
• Description: Python bivittatus pbv-miR-22-3p mature miRNA
• Sequence: 56 - AAGCUGCCAGUUGAAGAACUGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196