Stem-loop pbv-mir-101-1

Accession

MI0030204

Description

Python bivittatus pbv-mir-101-1 precursor miRNA

Sequence

aggcugcccuggcUCAGUUAUCACUGUGCUGAUGCUgucuauacuaaaggUACAGUACUGUGAUAACUGAAGgaugguagcca
.(((((((.....(((((((((((.((((((.((((............)))))))))).))))))))))).....))))))).

Structure

a       cuggc           U      A    gucua 
 ggcugcc     UCAGUUAUCAC GUGCUG UGCU     u
 |||||||     ||||||||||| |||||| ||||      
 ccgaugg     AGUCAAUAGUG CAUGAC AUgg     a
a       uagGA           U      -    aaauc 

Annotation confidence Not enough data

Genome context

KE954279.1: 114033-114115 [-]

Mature pbv-miR-101-5p

• Accession: MIMAT0038901
• Description: Python bivittatus pbv-miR-101-5p mature miRNA
• Sequence: 14 - UCAGUUAUCACUGUGCUGAUGCU - 36
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-101-3p

• Accession: MIMAT0038902
• Description: Python bivittatus pbv-miR-101-3p mature miRNA
• Sequence: 51 - UACAGUACUGUGAUAACUGAAG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196