Stem-loop pbv-mir-128-1

Accession

MI0030219

Description

Python bivittatus pbv-mir-128-1 precursor miRNA

Sequence

ucaugagcuguuggauuCGGGGCCGUAACACUGUCUGAGAggguuacauuucUCACAGUGAACCGGUCUCUUUuucagcugcuuucuggcuu
.((.((((.((((((...(((((((...((((((..((((((......))))))))))))...)))))))...)))))).))))..))....

Structure

---u  -u    u      uuC       UAA      CU      gu 
    ca  gagc guugga   GGGGCCG   CACUGU  GAGAgg  u
    ||  |||| ||||||   |||||||   ||||||  ||||||   
    gu  uucg cgacuu   CUCUGGC   GUGACA  CUcuuu  a
uucg  cu    u      UUU       CAA      --      ac 

Annotation confidence Low

Genome context

KE956497.1: 35240-35331 [+]

Mature pbv-miR-128-5p

• Accession: MIMAT0038920
• Description: Python bivittatus pbv-miR-128-5p mature miRNA
• Sequence: 18 - CGGGGCCGUAACACUGUCUGAGA - 40
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-128-3p

• Accession: MIMAT0038921
• Description: Python bivittatus pbv-miR-128-3p mature miRNA
• Sequence: 53 - UCACAGUGAACCGGUCUCUUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196