Stem-loop pbv-mir-129b

Accession

MI0030222

Description

Python bivittatus pbv-mir-129b precursor miRNA

Sequence

gucuucucuggguCUUUUUGCGGUCUGGGCUUUCugggucuguccaaccccguaucagaAAGCCCUUACCCCAAAAAGCAUccgggguuguacga
(((..(((((((((((((((.(((..(((((((((((((.......))))......)))))))))..))).))))))).))))))))..).))..

Structure

--  - uu        -       C   CU         ------    cu 
  gu c  cucugggu CUUUUUG GGU  GGGCUUUCu      gggu  g
  || |  |||||||| ||||||| |||  |||||||||      ||||  u
  ca g  ggggccUA GAAAAAC CCA  CCCGAAaga      ccca  c
ag  u uu        C       C   UU         cuaugc    ac 

Annotation confidence Not enough data

Genome context

KE953229.1: 75173-75267 [-]

Mature pbv-miR-129b-5p

• Accession: MIMAT0038924
• Description: Python bivittatus pbv-miR-129b-5p mature miRNA
• Sequence: 14 - CUUUUUGCGGUCUGGGCUUUC - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-129b-3p

• Accession: MIMAT0038925
• Description: Python bivittatus pbv-miR-129b-3p mature miRNA
• Sequence: 60 - AAGCCCUUACCCCAAAAAGCAU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196