Stem-loop pbv-mir-135-3

Accession

MI0030234

Description

Python bivittatus pbv-mir-135-3 precursor miRNA

Sequence

uccucuguuguggucUAUGGCUUUUUAUUCCUAUGUGAuugcuuuucauaauucAUGUAGGGCUAAAAGCCAUGGGuuacacaaaggaau
((((.(((.((((((((((((((((...((((((((((..............))))))))))..))))))))))))))))))).))))..

Structure

--    c   u                UAU          uugcuu 
  uccu ugu guggucUAUGGCUUUU   UCCUAUGUGA      u
  |||| ||| ||||||||||||||||   ||||||||||       
  agga aca cauuGGGUACCGAAAA   GGGAUGUAcu      u
ua    a   -                -UC          uaauac 

Annotation confidence Not enough data

Genome context

KE954012.1: 257831-257920 [-]

Mature pbv-miR-135-5p

• Accession: MIMAT0038941
• Description: Python bivittatus pbv-miR-135-5p mature miRNA
• Sequence: 16 - UAUGGCUUUUUAUUCCUAUGUGA - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-135-3-3p

• Accession: MIMAT0038944
• Description: Python bivittatus pbv-miR-135-3-3p mature miRNA
• Sequence: 55 - AUGUAGGGCUAAAAGCCAUGGG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196