Stem-loop pbv-mir-137b

Accession

MI0030236

Description

Python bivittatus pbv-mir-137b precursor miRNA

Sequence

ugacuaugcucccuucgaugACGGGUAUUCUUGGGUAUAUAAUacagauggcguuguUAUUGCUUGAGAAUACGCGUAGuugaggggaaguugc
.((((....((((((((((.(((.(((((((((((((.((((((..(....)..))))))))))))))))))).))).))))))))))))))..

Structure

-u    augc          g   G             U      ca a 
  gacu    ucccuucgau ACG GUAUUCUUGGGUA AUAAUa  g u
  ||||    |||||||||| ||| ||||||||||||| ||||||  |  
  uuga    aggggaguuG UGC CAUAAGAGUUCGU UAUugu  c g
cg    ----          A   G             -      ug g 

Annotation confidence Not enough data

Genome context

KE953225.1: 228401-228494 [+]

Mature pbv-miR-137b-5p

• Accession: MIMAT0038947
• Description: Python bivittatus pbv-miR-137b-5p mature miRNA
• Sequence: 21 - ACGGGUAUUCUUGGGUAUAUAAU - 43
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-137b-3p

• Accession: MIMAT0038948
• Description: Python bivittatus pbv-miR-137b-3p mature miRNA
• Sequence: 58 - UAUUGCUUGAGAAUACGCGUAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196