Stem-loop pbv-mir-138-2

Accession

MI0030238

Description

Python bivittatus pbv-mir-138-2 precursor miRNA

Sequence

gcucaguguagcAGCUGGUGUUGUGAAUCAGGCCGucaccuauuagagaacggcuacuucacaacaccaggguugcccugu
...(((.(((((..(((((((((((((...((((((...((.....)).))))))..))))))))))))).))))).))).

Structure

gcu   u     AG             UCA      cac  a 
   cag guagc  CUGGUGUUGUGAA   GGCCGu   cu u
   ||| |||||  |||||||||||||   ||||||   || u
   guc cguug  gaccacaacacuu   ucggca   ga a
--u   c     -g             -ca      --a  g 

Annotation confidence Not enough data

Genome context

KE953062.1: 339901-339981 [-]

Mature pbv-miR-138-5p

• Accession: MIMAT0038949
• Description: Python bivittatus pbv-miR-138-5p mature miRNA
• Sequence: 13 - AGCUGGUGUUGUGAAUCAGGCCG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196