Stem-loop pbv-mir-142

Accession

MI0030240

Description

Python bivittatus pbv-mir-142 precursor miRNA

Sequence

gacaguggacucaUCCAUAAAGUAGAAAGCACUAcuaaacgcuuguguccaagugUAGUGUUUCCUACUUUAUGGAugaguguacugug
.((((((.(((((((((((((((((.(((((((((.....(((((....)))))))))))))).))))))))))))))))).)))))).

Structure

g      g                 A         uaaac     u 
 acagug acucaUCCAUAAAGUAG AAGCACUAc     gcuug g
 |||||| ||||||||||||||||| |||||||||     |||||  
 ugucau ugaguAGGUAUUUCAUC UUUGUGAUg     ugaac u
g      g                 C         -----     c 

Annotation confidence Not enough data

Genome context

KE953330.1: 386968-387056 [-]

Mature pbv-miR-142-5p

• Accession: MIMAT0038953
• Description: Python bivittatus pbv-miR-142-5p mature miRNA
• Sequence: 14 - UCCAUAAAGUAGAAAGCACUA - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-142-3p

• Accession: MIMAT0038954
• Description: Python bivittatus pbv-miR-142-3p mature miRNA
• Sequence: 56 - UAGUGUUUCCUACUUUAUGGA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196