Stem-loop pbv-mir-144

Accession

MI0030242

Description

Python bivittatus pbv-mir-144 precursor miRNA

Sequence

ggggcuccagcUCGGAUAUCAUCAUAUACUGUAAguuggaaucagacacUACAGUAUAGAUGAUGUACUaucuggagcuccugga
((((((((((.....((((((((.(((((((((.((.(........)))))))))))))))))))).....))))))))))....

Structure

----          cUCGG        A         A  u gaa 
    ggggcuccag     AUAUCAUC UAUACUGUA gu g   u
    ||||||||||     |||||||| ||||||||| || |    
    ccucgagguc     UGUAGUAG AUAUGACAU ca c   c
aggu          uaUCA        -         -  - aga 

Annotation confidence Not enough data

Genome context

KE957536.1: 98840-98924 [-]

Mature pbv-miR-144-5p

• Accession: MIMAT0038957
• Description: Python bivittatus pbv-miR-144-5p mature miRNA
• Sequence: 12 - UCGGAUAUCAUCAUAUACUGUAA - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-144-3p

• Accession: MIMAT0038958
• Description: Python bivittatus pbv-miR-144-3p mature miRNA
• Sequence: 50 - UACAGUAUAGAUGAUGUACU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196