Stem-loop pbv-mir-148a

Accession

MI0030247

Description

Python bivittatus pbv-mir-148a precursor miRNA

Sequence

aguuuugguuucuggaagCAAAGUUCUGUGACACUCGGACUcugauuauaauagaagUCAGUGCACUACAGAACUUUGUcuccaggggcugcagcag
.(((.(((((((((((.(((((((((((((.((((..(((((((.......))).))))))))...))))))))))))).))))))))))).)))..

Structure

-a   u           a             --A    CG    -   au 
  guu ugguuucugga gCAAAGUUCUGUG   CACU  GACU cug  u
  ||| ||||||||||| |||||||||||||   ||||  |||| |||  a
  cga gucggggaccu UGUUUCAAGACAU   GUGA  CUga gau  u
ga   c           c             CAC    --    a   aa 

Annotation confidence Not enough data

Genome context

KE953020.1: 321908-322004 [+]

Mature pbv-miR-148a-5p

• Accession: MIMAT0038964
• Description: Python bivittatus pbv-miR-148a-5p mature miRNA
• Sequence: 19 - CAAAGUUCUGUGACACUCGGACU - 41
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-148a-3p

• Accession: MIMAT0038965
• Description: Python bivittatus pbv-miR-148a-3p mature miRNA
• Sequence: 58 - UCAGUGCACUACAGAACUUUGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196