Stem-loop pbv-mir-148b

Accession

MI0030248

Description

Python bivittatus pbv-mir-148b precursor miRNA

Sequence

cuguuacagcgcuugagguGAAGUUCUGUUAUACACUUUGACUguggcuacauggaagUCAGUGCAUCACAGAACUUUGUcucgagagcuuuuca
.......(((.((((((((((((((((((.((.((((..(((((((....)))...)))))))).)).)))))))))))))))))).))).....

Structure

cuguuac   g                  U  A    UU    ---   g 
       agc cuugagguGAAGUUCUGU AU CACU  GACU   gug c
       ||| |||||||||||||||||| || ||||  ||||   |||  
       ucg gagcucUGUUUCAAGACA UA GUGA  CUga   uac u
--acuuu   a                  C  C    --    agg   a 

Annotation confidence Not enough data

Genome context

KE953059.1: 20821-20915 [+]

Mature pbv-miR-148b-5p

• Accession: MIMAT0038966
• Description: Python bivittatus pbv-miR-148b-5p mature miRNA
• Sequence: 20 - GAAGUUCUGUUAUACACUUUGACU - 43
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-148b-3p

• Accession: MIMAT0038967
• Description: Python bivittatus pbv-miR-148b-3p mature miRNA
• Sequence: 59 - UCAGUGCAUCACAGAACUUUGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196