Stem-loop pbv-mir-150

Accession

MI0030249

Description

Python bivittatus pbv-mir-150 precursor miRNA

Sequence

acucuucuccuuucUCUCCCAACCCUUGUACCAGUGucagcuguugcaccuaCUGGUACAGAGGAUGGAAGGGagagugguucagag
.((((.((.((((((((.(((.((.(((((((((((...((....))...))))))))))).)).))).)))))))).))...))))

Structure

a    --u  c        C   A  C           uca  u 
 cucu   cu cuuucUCU CCA CC UUGUACCAGUG   gc g
 ||||   || |||||||| ||| || |||||||||||   ||  
 gaga   gg gagaGGGA GGU GG GACAUGGUCau   cg u
-    cuu  u        A   A  A           cca  u 

Annotation confidence Not enough data

Genome context

KE953347.1: 382657-382743 [+]

Mature pbv-miR-150-5p

• Accession: MIMAT0038968
• Description: Python bivittatus pbv-miR-150-5p mature miRNA
• Sequence: 15 - UCUCCCAACCCUUGUACCAGUG - 36
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-150-3p

• Accession: MIMAT0038969
• Description: Python bivittatus pbv-miR-150-3p mature miRNA
• Sequence: 53 - CUGGUACAGAGGAUGGAAGGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196