Stem-loop pbv-mir-153-1

Accession

MI0030250

Description

Python bivittatus pbv-mir-153-1 precursor miRNA

Sequence

uagcaguugccaguGUCAUUUUUGUGAUGUUGCAGCUaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUCAuuggaaacugu
..((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).))))))

Structure

ua      g      -             GU       -a  aa 
  gcaguu ccaguG UCAUUUUUGUGAU  UGCAGCU  gu  u
  |||||| |||||| |||||||||||||  |||||||  ||  a
  ugucaa gguuAC AGUGAAAACACUG  ACGUUga  cg  u
--      a      U             AU       cc  aa 

Annotation confidence Not enough data

Genome context

KE953157.1: 252455-252541 [-]

Mature pbv-miR-153-5p

• Accession: MIMAT0038970
• Description: Python bivittatus pbv-miR-153-5p mature miRNA
• Sequence: 15 - GUCAUUUUUGUGAUGUUGCAGCU - 37
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-153-3p

• Accession: MIMAT0038971
• Description: Python bivittatus pbv-miR-153-3p mature miRNA
• Sequence: 54 - UUGCAUAGUCACAAAAGUGAUCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196