miRBase entry: pbv-mir-181a-2

Stem-loop pbv-mir-181a-2

Accession

MI0030254

Description

Python bivittatus pbv-mir-181a-2 precursor miRNA

Sequence

gauagcuucagcgAACAUUCAACGCUGUCGGUGAGUUUgacaugucaggauaaaccaucgaccguugacuguaccuugagguuuaucac
(((((((((((.(.(((.((((((..(((((((.(((((.(......)..)))))))))))))))))).))).).)))))).)))))..

Structure

--     -      c A   U      CU       A     -a au 
  gauag cuucag g ACA UCAACG  GUCGGUG GUUUg  c  g
  ||||| |||||| | ||| ||||||  ||||||| |||||  |   
  cuauu ggaguu c ugu aguugc  cagcuac caaau  g  u
ca     u      c a   c      --       -     ag ac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KE955294.1: 122513-122601 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-181a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-181a-5p

Accession	MIMAT0038975
Description	Python bivittatus pbv-miR-181a-5p mature miRNA
Sequence	14 - AACAUUCAACGCUGUCGGUGAGUUU - 38
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196