Stem-loop pbv-mir-181b-1

Accession

MI0030256

Description

Python bivittatus pbv-mir-181b-1 precursor miRNA

Sequence

ggucacaaucaACAUUCAUUGCUGUCGGUGGGUUuaacuuuguggacaaGCUCACUGAACAAUGAAUGCAAcuguggcccca
(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))...

Structure

---       aucaA         CUG           aa  u 
   ggucaca     CAUUCAUUG   UCGGUGGGUUu  cu u
   |||||||     |||||||||   |||||||||||  ||  
   ccggugu     GUAAGUAAC   AGUCACUCGaa  gg g
acc       -cAAC         --A           ca  u 

Annotation confidence Not enough data

Genome context

KE954498.1: 230953-231034 [+]

Mature pbv-miR-181b-5p

• Accession: MIMAT0038977
• Description: Python bivittatus pbv-miR-181b-5p mature miRNA
• Sequence: 12 - ACAUUCAUUGCUGUCGGUGGGUU - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-181b-3p

• Accession: MIMAT0038978
• Description: Python bivittatus pbv-miR-181b-3p mature miRNA
• Sequence: 50 - GCUCACUGAACAAUGAAUGCAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196