miRBase entry: pbv-mir-181c

Stem-loop pbv-mir-181c

Accession

MI0030258

Description

Python bivittatus pbv-mir-181c precursor miRNA

Sequence

gucacaaucAACAUUCAUUCUGUCGGUGGGUuguuaugcuggaggagaagcucacugaucagugaaugcaacuguggc
((((((.....((((((((..(((((((((((................))))))))))).))))))))....))))))

Structure

      aucAA        CU           guuaugc 
gucaca     CAUUCAUU  GUCGGUGGGUu       u
||||||     ||||||||  |||||||||||        
cggugu     guaaguga  uagucacucga       g
      -caac        -c           agaggag

Annotation confidence Not enough data

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Genome context

KE953590.1: 289002-289079 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-181c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-181c-5p

Accession	MIMAT0038979
Description	Python bivittatus pbv-miR-181c-5p mature miRNA
Sequence	10 - AACAUUCAUUCUGUCGGUGGGU - 31
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196