Stem-loop pbv-mir-196c

Accession

MI0030270

Description

Python bivittatus pbv-mir-196c precursor miRNA

Sequence

uggucggugauuUAGGUAGUUUCUCGUUGUUGAGgcugaacauuucucucucugcagcacgaaacugccuucaucacuucaguuu
.....((((((..((((((((((..(((((.((((..(((...)))..)))).)))))..))))))))))..)))))).......

Structure

--ugguc      uU          UC     U    cu   c 
       ggugau  AGGUAGUUUC  GUUGU GAGg  gaa  
       ||||||  ||||||||||  ||||| ||||  ||| a
       ucacua  uccgucaaag  cgacg cucu  cuu  
uuugacu      cu          ca     u    cu   u 

Annotation confidence Not enough data

Genome context

KE953980.1: 281956-282040 [+]

Mature pbv-miR-196c-5p

• Accession: MIMAT0038995
• Description: Python bivittatus pbv-miR-196c-5p mature miRNA
• Sequence: 13 - UAGGUAGUUUCUCGUUGUUGAG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196