Stem-loop pbv-mir-199-3

Accession

MI0030273

Description

Python bivittatus pbv-mir-199-3 precursor miRNA

Sequence

uccacuccgucuuCCCAGUGUUCGGACUACCUGUUCaggacuacaagauuguACAGUAGUCUGCACAUUGGUUaggcugugcugggauacacagca
........((((..(((((((.((((((((.(((.(((..........))).))))))))))).)))))))..))))..(((((.......)))))

Structure

-----------uccacucc    uC       U        C   U   gacu 
                   gucu  CCAGUGU CGGACUAC UGU Cag    a
                   ||||  ||||||| |||||||| ||| |||     
                   cgga  GGUUACA GUCUGAUG ACA guu    c
acgacacauagggucgugu    UU       C        -   u   agaa 

Annotation confidence Not enough data

Genome context

KE955379.1: 131002-131097 [+]

Mature pbv-miR-199-3p

• Accession: MIMAT0038997
• Description: Python bivittatus pbv-miR-199-3p mature miRNA
• Sequence: 53 - ACAGUAGUCUGCACAUUGGUU - 73
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-199-3-5p

• Accession: MIMAT0038998
• Description: Python bivittatus pbv-miR-199-3-5p mature miRNA
• Sequence: 14 - CCCAGUGUUCGGACUACCUGUUC - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196