Stem-loop pbv-mir-203

Accession

MI0030277

Description

Python bivittatus pbv-mir-203 precursor miRNA

Sequence

gcucucucagccugcugggugcAGUGGUUCUUAACAGUUCAACAguucuguagcauaauuGUGAAAUGUUUAGGACCACUUGauccggacggcuugcgcg
((.(....((((..((((((..(((((((((.((((.((((.(((((.((...)).))))))))).)))).)))))))))..))))))..)))).).)).

Structure

-  u ucuc    ug      gc         U    G    A     c  u 
 gc c    agcc  cugggu  AGUGGUUCU AACA UUCA CAguu ug  
 || |    ||||  ||||||  ||||||||| |||| |||| ||||| || a
 cg g    ucgg  ggccua  UCACCAGGA UUGU AAGU Guuaa ac  
g  c ---u    ca      GU         U    A    -     u  g 

Annotation confidence Not enough data

Genome context

KE953268.1: 83979-84078 [-]

Mature pbv-miR-203-5p

• Accession: MIMAT0039004
• Description: Python bivittatus pbv-miR-203-5p mature miRNA
• Sequence: 23 - AGUGGUUCUUAACAGUUCAACA - 44
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-203-3p

• Accession: MIMAT0039005
• Description: Python bivittatus pbv-miR-203-3p mature miRNA
• Sequence: 61 - GUGAAAUGUUUAGGACCACUUG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196