Stem-loop pbv-mir-204-3

Accession

MI0030280

Description

Python bivittatus pbv-mir-204-3 precursor miRNA

Sequence

cuuggcucuguagcuUUCCCUUUGUCAUCCUAUGCCUGagaaauucagggagGCUGGGACGGUGAAGGGAAGCCcacagcguuauaguu
..((((.((((.((((.(((((((((.((((((.(((((.....))))).)...))))).)))))))))))))..)))).)))).....

Structure

---cu    u    -a    U         A     --- G     g 
     uggc cugu  gcuU CCCUUUGUC UCCUA   U CCUGa a
     |||| ||||  |||| ||||||||| |||||   | ||||| a
     auug gaca  CGAA GGGAAGUGG AGGGU   a ggacu a
uugau    c    cC    -         C     CGg g     u 

Annotation confidence Not enough data

Genome context

KE956236.1: 133453-133541 [-]

Mature pbv-miR-204-5p

• Accession: MIMAT0039006
• Description: Python bivittatus pbv-miR-204-5p mature miRNA
• Sequence: 16 - UUCCCUUUGUCAUCCUAUGCCUG - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-204-3-3p

• Accession: MIMAT0039008
• Description: Python bivittatus pbv-miR-204-3-3p mature miRNA
• Sequence: 53 - GCUGGGACGGUGAAGGGAAGCC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196