Stem-loop pbv-mir-219-2

Accession

MI0030295

Description

Python bivittatus pbv-mir-219-2 precursor miRNA

Sequence

gaaccuuugcuccUGAUUGUCCAAACGCAAUUCUUGugcagaaaaacaugccaaccaAGAAUUGUGUCUGGACAUCGGUggcuaagccuucga
(((.(((.(((.(((((.(((((.((((((((((((.(((........)))....)))))))))))).)))))))))).))).)))..)))..

Structure

--   -c   u   c     U     A            ---u   gaa 
  gaa  cuu gcu cUGAU GUCCA ACGCAAUUCUUG    gca   a
  |||  ||| ||| ||||| ||||| ||||||||||||    |||    
  cuu  gaa cgg GGCUA CAGGU UGUGUUAAGAac    cgu   a
ag   cc   u   U     -     C            caac   aca 

Annotation confidence Not enough data

Genome context

KE955379.1: 23995-24087 [+]

Mature pbv-miR-219-5p

• Accession: MIMAT0039029
• Description: Python bivittatus pbv-miR-219-5p mature miRNA
• Sequence: 14 - UGAUUGUCCAAACGCAAUUCUUG - 36
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-219-3p

• Accession: MIMAT0039030
• Description: Python bivittatus pbv-miR-219-3p mature miRNA
• Sequence: 58 - AGAAUUGUGUCUGGACAUCGGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196