Stem-loop pbv-mir-456

Accession

MI0030316

Description

Python bivittatus pbv-mir-456 precursor miRNA

Sequence

uguguaugugugcGCAGGCAUCUUCUCAGCCUACauguggauucuuaaaucugCAGGCUGGUUAGAUGGUUGUCauacauucauc
.(((.(((((((.((((.(((((..(((((((....(((((((....))))))))))))))..))))).))))))))))).))).

Structure

u   u       c    G     UC       ACau       c 
 gug augugug GCAG CAUCU  UCAGCCU    guggauu u
 ||| ||||||| |||| |||||  |||||||    |||||||  
 uac uacauaC UGUU GUAGA  GGUCGGA    Cgucuaa u
c   u       -    G     UU       ----       a 

Annotation confidence Not enough data

Genome context

KE953008.1: 414046-414130 [+]

Mature pbv-miR-456-5p

• Accession: MIMAT0039059
• Description: Python bivittatus pbv-miR-456-5p mature miRNA
• Sequence: 14 - GCAGGCAUCUUCUCAGCCUAC - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-456-3p

• Accession: MIMAT0039060
• Description: Python bivittatus pbv-miR-456-3p mature miRNA
• Sequence: 54 - CAGGCUGGUUAGAUGGUUGUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196