Stem-loop pbv-mir-458

Accession

MI0030317

Description

Python bivittatus pbv-mir-458 precursor miRNA

Sequence

cauggugcagauggcagcgccauuuucagagcuauaaacaguaucauugucAUAGCUCUUUGAAUGGUACUGCcguauguaccg
...((((((.(((((((.(((((((..((((((((..(((((...))))).))))))))..))))))).))))))).)))))).

Structure

cau      g       c       uc        aa     a 
   ggugca auggcag gccauuu  agagcuau  acagu  
   |||||| ||||||| |||||||  ||||||||  ||||| u
   ccaugu ugcCGUC UGGUAAG  UCUCGAUA  uguua  
--g      a       A       UU        -c     c 

Annotation confidence Not enough data

Genome context

KE959752.1: 25053-25136 [+]

Mature pbv-miR-458-3p

• Accession: MIMAT0039061
• Description: Python bivittatus pbv-miR-458-3p mature miRNA
• Sequence: 52 - AUAGCUCUUUGAAUGGUACUGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196