Stem-loop pbv-mir-490

Accession

MI0030319

Description

Python bivittatus pbv-mir-490 precursor miRNA

Sequence

auguucaugauucgacaCCAUGGAUCUCCAGGUGGGUCaagauuauagagaaacaCCAACCUGGAGGACUCCAUGCUGuugagcuguucacaagc
.((..((.(.(((((((.(((((((((((((((.(((.................))).)))))))))..)))))).))))))))))..)).....

Structure

----a  uu  u a       C      --         G   Caagauu 
     ug  ca g uucgaca CAUGGA  UCUCCAGGU GGU       a
     ||  || | ||||||| ||||||  ||||||||| |||       u
     ac  gu c gaguuGU GUACCU  GGAGGUCCA CCa       a
cgaac  uu  - -       C      CA         A   caaagag 

Annotation confidence Not enough data

Genome context

KE954944.1: 24235-24329 [-]

Mature pbv-miR-490-5p

• Accession: MIMAT0039063
• Description: Python bivittatus pbv-miR-490-5p mature miRNA
• Sequence: 18 - CCAUGGAUCUCCAGGUGGGUC - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-490-3p

• Accession: MIMAT0039064
• Description: Python bivittatus pbv-miR-490-3p mature miRNA
• Sequence: 56 - CCAACCUGGAGGACUCCAUGCUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196