Stem-loop pbv-mir-551b

Accession

MI0030322

Description

Python bivittatus pbv-mir-551b precursor miRNA

Sequence

accuccauuggcuccaGAAAUCAAGGCUGGGUGAGACCUcgugaagaaacuagaagGCGACCCAUACUUGGUUUCAGgagcugugaggaua
.((((...(((((((.(((((((((..(((((..(.(((..((.......))..)))).)))))..))))))))).))))))).))))...

Structure

--a    cau       a         GC     GA A   cg  aa 
   ccuc   uggcucc GAAAUCAAG  UGGGU  G CCU  ug  g
   ||||   ||||||| |||||||||  |||||  | |||  ||  a
   ggag   gucgagG CUUUGGUUC  ACCCA  C Gga  au  a
aua    --u       A         AU     -G -   ag  ca 

Annotation confidence Not enough data

Genome context

KE956179.1: 112483-112573 [+]

Mature pbv-miR-551b-5p

• Accession: MIMAT0039068
• Description: Python bivittatus pbv-miR-551b-5p mature miRNA
• Sequence: 17 - GAAAUCAAGGCUGGGUGAGACCU - 39
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-551b-3p

• Accession: MIMAT0039069
• Description: Python bivittatus pbv-miR-551b-3p mature miRNA
• Sequence: 57 - GCGACCCAUACUUGGUUUCAG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196