Stem-loop pbv-mir-1329

Accession

MI0030327

Description

Python bivittatus pbv-mir-1329 precursor miRNA

Sequence

caucugguuguaggggUACAGUGAUCAGGUUACGACGGAUuucucuaguaacaaCCCCGUAGCUUGAUCACCAUCUcccuaugacucagau
.(((((((((((((((....((((((((((((((..((................)).))))))))))))))....)))))))))).)))))

Structure

c     -          UACA              AC  AUuucuc 
 aucug guuguagggg    GUGAUCAGGUUACG  GG       u
 ||||| ||||||||||    ||||||||||||||  ||        
 uagac caguaucccU    CACUAGUUCGAUGC  CC       a
-     u          CUAC              -C  aacaaug 

Annotation confidence Not enough data

Genome context

KE953287.1: 192163-192253 [-]

Mature pbv-miR-1329-5p

• Accession: MIMAT0039075
• Description: Python bivittatus pbv-miR-1329-5p mature miRNA
• Sequence: 17 - UACAGUGAUCAGGUUACGACGGAU - 40
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-1329-3p

• Accession: MIMAT0039076
• Description: Python bivittatus pbv-miR-1329-3p mature miRNA
• Sequence: 55 - CCCCGUAGCUUGAUCACCAUCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196