Stem-loop pbv-mir-1641

Accession

MI0030330

Description

Python bivittatus pbv-mir-1641 precursor miRNA

Sequence

auacagggcuuuuccUGGGAUCAAUGACCAUCUGGGggucaucaucuccuccaaguuaguuauuaauccuuaggaaacacuuggugcuuu
...((((...(((((((((((.((((((...(((((((.........))))).))...)))))).)))).)))))))..)))).......

Structure

----aua    gcu       -    C      CAU  -     uca 
       cagg   uuuccUG GGAU AAUGAC   CU GGGgg   u
       ||||   ||||||| |||| ||||||   || |||||   c
       guuc   aaaggau ccua uuauug   ga ccucc   a
uuucgug    -ac       u    a      auu  a     ucu 

Annotation confidence Not enough data

Genome context

KE957440.1: 24770-24859 [-]

Mature pbv-miR-1641-5p

• Accession: MIMAT0039081
• Description: Python bivittatus pbv-miR-1641-5p mature miRNA
• Sequence: 16 - UGGGAUCAAUGACCAUCUGGG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196